Protein Bagels with Cottage Cheese: Delicious Recipe

Isabella

Modified:February 24, 2026

Published:February 24, 2026

by Isabella Mansouri

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Beyond the Bagel Aisle: Why You Need These Protein Bagels

Say goodbye to bland, calorie-dense morning meals and hello to a revolutionary breakfast experience! I’m talking about homemade Protein Bagels with Cottage Cheese — a game-changer that will elevate your breakfast game from ordinary to extraordinary. Imagine biting into a perfectly golden, chewy bagel, rich in flavor, and knowing that each bite is packed with nourishing protein. These aren’t just any bagels; they’re your new reason to jump out of bed!

Like many of you, I spent years sifting through the supermarket bagel aisle, often feeling underwhelmed by the options. They either lacked flavor, left me feeling sluggish, or were simply nutritional voids. My journey began with a quest for a truly satisfying, yet wholesome, bagel. After countless experiments and a few hilarious kitchen mishaps, I finally cracked the code to these homemade protein powerhouses. The texture is divine — crispy on the outside, wonderfully soft and chewy within, just like a classic bagel should be. But unlike their traditional counterparts, these beauties are packed with protein, thanks to our secret ingredient: cottage cheese! They’re not only incredibly delicious but also keep you feeling full and energized, making them perfect for busy mornings or a post-workout refuel. If you’re looking for more easy, delicious, and sometimes healthier recipes, you can always See more easy recipes on my site!

How This Recipe Works: The Science of a Better Bagel

  • The Magical Cottage Cheese: It’s not just for texture; it’s a powerhouse of protein and brings a subtle tang that enriches the overall flavor, making these bagels exceptionally moist without adding excess fat.
  • Self-Rising Flour & Protein Powder Harmony: Using self-rising flour simplifies the process by pre-packaging the leavening. Combined with protein powder, it creates a dough that’s easy to handle and bakes into a bagel with a lovely crumb structure and an added nutritional boost.
  • The Boiling-Baking Method: A quick dip in boiling water before baking is the classic secret to that signature bagel chew, forming a crust that maintains its shape and density, while baking ensures a golden brown exterior and a fully cooked interior.
  • One-Bowl Wonder: This recipe minimizes cleanup! Most of the mixing happens in a single bowl, making your baking experience as enjoyable as eating the finished product.

Ingredients and Substitutions: Your Bagel Building Blocks

Here is what you need and why:

Cottage Cheese (Full-Fat or Low-Fat? Why it Matters): This is our star ingredient for moisture and protein. I always recommend using full-fat cottage cheese for the richest flavor and best texture. The extra fat content contributes to a more tender and decadent crumb. However, if you’re watching calories or fat intake, low-fat cottage cheese works well too; just be aware the bagels might be slightly less tender. The key is to blend it until it’s completely smooth – no chunky surprises!

Self-Rising Flour (DIY Self-Rising Flour Explained): This incredibly convenient flour already has baking powder and salt mixed in, simplifying our recipe. If you don’t have self-rising flour on hand, don’t fret! You can easily make your own. For every one cup of all-purpose flour, whisk in 1.5 teaspoons of baking powder and 1/4 teaspoon of fine salt. It’s a simple substitution that gets the job done without a special trip to the store. King Arthur Baking has a fantastic guide on making your own self-rising flour if you want to geek out on the science.

Protein Powder (Unflavored vs. Flavored – Choosing Wisely): Unflavored whey or casein protein powder is my top recommendation here, as it seamlessly integrates without altering the bagel’s savory profile. If you only have vanilla flavored protein powder, that can work too, especially if you’re making a slightly sweeter bagel (perhaps with cinnamon sugar topping!). Just make sure to adjust any additional sweetness accordingly. Avoid heavily flavored protein powders like chocolate or strawberry unless you specifically want that unique bagel flavor.

Egg (The Wash for a Beautiful Crust): A simple egg wash, made by whisking one egg with a tablespoon of water, is crucial for achieving that stunning golden-brown, shiny crust that makes bagels so appealing. It also helps your toppings adhere beautifully to the surface.

Everything Bagel Seasoning (Or Your Favorite Toppings): This classic blend of sesame seeds, poppy seeds, dried garlic, dried onion, and salt is a match made in heaven for these protein bagels. However, feel free to get creative! Other fantastic options include plain sesame seeds, poppy seeds, coarse sea salt, dried onion flakes, or even a dash of cinnamon sugar for a sweet twist.

How to Make Protein Bagels with Cottage Cheese

Follow these step-by-step photos:

1. Prep Your Workspace & Blend the Cottage Cheese

Preheat your oven to 375°F (190°C). Line a baking sheet with parchment paper or a silicone baking mat and set it aside. In a blender or food processor, combine the cottage cheese until it’s completely smooth and creamy. This is crucial for a smooth dough texture without any curds. Set aside.

2. Combine Dry Ingredients & Form the Dough

In a large mixing bowl, whisk together the self-rising flour, protein powder, and any optional salt (if not using self-rising flour). Create a well in the center and pour in the blended cottage cheese. Mix with a spoon or your hands until a shaggy dough forms. Turn the dough out onto a lightly floured surface and knead gently for 2-3 minutes, until it comes together into a cohesive, non-sticky ball. Do not overmix!

3. Shape Your Bagels & Prepare for Boiling

Divide the dough into 6 equal pieces. Roll each piece into a small ball, then use your thumb or the back of a spoon to poke a hole in the center. Gently stretch the dough to widen the hole to about 1-1.5 inches, creating a classic bagel shape. Bring a medium pot of water to a rolling boil. Carefully drop 2-3 bagels into the boiling water at a time for 30 seconds per side. This step gives them their signature chew. Remove with a slotted spoon and place them on the prepared baking sheet.

4. Egg Wash, Top, and Bake to Perfection

In a small bowl, whisk together the egg and water for the egg wash. Brush the tops and sides of each boiled bagel generously with the egg wash. Sprinkle generously with Everything Bagel seasoning or your chosen toppings. Bake for 20-25 minutes, or until the bagels are golden brown and sound hollow when tapped on the bottom. Let them cool slightly on a wire rack before slicing and serving. Enjoy your delicious homemade Protein Bagels with Cottage Cheese!

Expert Tips for Success: Avoid Common Bagel Blunders

  • Don’t Overmix the Dough: This is a quick bread-style dough, not a yeast dough. Overmixing will develop too much gluten, resulting in tough bagels. Knead just until the ingredients are combined and the dough is smooth.
  • Achieving Uniform Bagel Holes: After poking the hole, gently stretch and rotate the dough around your finger to ensure the hole stays open and is wide enough. It will shrink a bit during baking, so make it a little larger than you desire the final hole to be.
  • The Importance of a Good Egg Wash: Don’t skip this step! The egg wash is what gives your bagels that beautiful golden, shiny crust and helps your toppings adhere perfectly. For an even richer color, you can add a tiny splash of milk to your egg wash.
  • Adjusting Baking Time: Oven Variations Matter: Every oven is different, so baking times are always approximate. Keep an eye on your bagels, especially during the last 5-7 minutes. They should be deeply golden brown. If they’re browning too quickly, you can loosely tent them with foil.
  • Smooth Cottage Cheese is Key: Ensure your cottage cheese is completely smooth and lump-free from blending. This prevents a lumpy texture in your finished bagels and distributes moisture evenly throughout the dough.

What to Serve With Your Protein Bagels

Now that you’ve got these incredible Protein Bagels with Cottage Cheese hot out of the oven, the possibilities for delicious pairings are endless!

  • Classic Spreads: Nothing beats classic cream cheese — plain, chive, or even a whipped veggie cream cheese. For a healthier option, smash some avocado with a sprinkle of everything bagel seasoning (more is always better!) or slather on your favorite nut butter like almond or peanut butter.
  • Savory Toppings: Elevate your breakfast or brunch with elegant savory options. Think thinly sliced smoked salmon with capers and red onion, scrambled or fried eggs, or a slice of lean turkey or ham for an extra protein boost.
  • Sweet Options: For those with a sweet tooth, treat your protein bagel like a canvas for fruit jams, a drizzle of local honey, or a generous sprinkle of cinnamon sugar. They’re surprisingly versatile!

Storing and Reheating: Keep Your Bagels Fresh

To ensure your homemade Protein Bagels with Cottage Cheese stay tasting their best, proper storage is essential.

  • Room Temperature Storage: These bagels are best enjoyed fresh, but they can be stored at room temperature in an airtight container or a sealed plastic bag for up to 2-3 days. Make sure they are completely cooled before storing to prevent condensation, which can make them soggy.
  • Freezing for Later: Your Meal Prep Secret Weapon: These bagels freeze beautifully! Once completely cooled, place them in a single layer in a freezer-safe bag or container. You can pre-slice them before freezing for convenience. They will keep well in the freezer for up to 3 months. This is perfect for meal prepping a healthy breakfast option!
  • Best Reheating Methods:
    • Oven: For the best texture, preheat your oven to 350°F (175°C). If frozen, you can reheat them directly from the freezer; wrap them in foil and bake for 15-20 minutes, or until warmed through. If thawed, 5-7 minutes should suffice for a delightfully crispy exterior.
    • Toaster: This is my go-to for a quick reheat! Slice your bagel, then toast it until it’s warmed and slightly crispy. If frozen, you might need a longer toast time or two rounds.
    • Microwave: While convenient, the microwave can sometimes make bagels a bit chewy rather than crispy. If you’re in a hurry, microwave for 20-30 seconds. It’s best used if you’re going to toast it afterward to regain some crispness.

FAQ: Your Protein Bagel Questions Answered

Can I use regular flour instead of self-rising?
Yes, absolutely! For every 1 cup of all-purpose flour, whisk in 1.5 teaspoons of baking powder and 1/4 teaspoon of fine salt to make your own self-rising flour.
What kind of protein powder works best?
Unflavored whey or casein protein powder is ideal as it doesn’t alter the flavor profile. If using vanilla protein powder, be mindful of additional sweetness and how it might impact savory toppings. Avoid strongly flavored protein powders.
Are these bagels gluten-free?
As written, this recipe is not gluten-free as it uses self-rising flour (which contains wheat). You can experiment with a 1:1 gluten-free self-rising flour blend, but results may vary in texture and rise.
How many calories are in one protein bagel?
The nutritional information will vary based on the specific brands of ingredients you use (e.g., full-fat vs. low-fat cottage cheese, type of protein powder). On average, one bagel could range from 180-250 calories. For precise information, I recommend inputting your exact ingredients into an online recipe calculator.
Can I make these ahead of time?
Yes, these bagels are perfect for making ahead! You can store them for up to 2-3 days at room temperature, or freeze them for up to 3 months. Reheat per the instructions in the ‘Storing and Reheating’ section for best results.
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Protein Bagels with Cottage Cheese: Delicious Recipe


  • Total Time: 40 minutes
  • Yield: 6 bagels 1x

Description

Discover how to make chewy, protein-packed bagels using cottage cheese and self-rising flour. This easy recipe promises a delicious and nutritious twist on your favorite breakfast.


Ingredients

Scale
  • 1 cup (226g) cottage cheese (full-fat recommended), blended smooth
  • 1 ½ cups (180g) self-rising flour (or homemade equivalent)
  • ½ cup (50g) unflavored whey or casein protein powder
  • 1 large egg, whisked with 1 tbsp water (for egg wash)
  • 2 tbsp Everything Bagel seasoning (or desired toppings)

Instructions

  • Preheat oven to 375°F (190°C). Line a baking sheet with parchment paper. Blend cottage cheese until completely smooth.
  • In a large bowl, combine self-rising flour and protein powder. Add blended cottage cheese and mix until a shaggy dough forms. Knead gently on a lightly floured surface for 2-3 minutes until cohesive.
  • Divide dough into 6 equal pieces. Roll each piece into a ball, then poke a hole in the center and stretch to form a bagel shape (approx. 1-1.5 inch hole).
  • Bring a pot of water to a boil. Boil bagels for 30 seconds per side, then transfer to the baking sheet.
  • Brush bagels with egg wash and sprinkle with Everything Bagel seasoning.
  • Bake for 20-25 minutes, or until golden brown and cooked through. Cool on a wire rack before serving.
  • Prep Time: 15 mins
  • Cook Time: 25 mins

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